TY - JOUR
T1 - Identifying common genome-wide risk genes for major psychiatric traits
AU - Liu, Sha
AU - Rao, Shuquan
AU - Xu, Yong
AU - Li, Jun
AU - Huang, Hailiang
AU - Zhang, Xu
AU - Fu, Hui
AU - Wang, Qiang
AU - Cao, Hongbao
AU - Baranova, Ancha
AU - Jin, Chunhui
AU - Zhang, Fuquan
N1 - Publisher Copyright:
© 2019, Springer-Verlag GmbH Germany, part of Springer Nature.
PY - 2020/2/1
Y1 - 2020/2/1
N2 - Major psychiatric traits are genetically inter-correlated with one another, but it not well known which genes play pleiotropic effects across different traits. We curated and compared genes identified from large-scale genome-wide association studies for seven psychiatric traits, including depression, bipolar disorder, schizophrenia, autism spectrum disorder, attention-deficit/hyperactivity disorder, anxiety and neuroticism. We then explored biological functions of the top pleiotropic genes. A total of 243 cross-trait genes were identified for the seven traits. Except for autism spectrum disorder, there was significant enrichment of overlapped genes across these psychiatric traits. Chromosome 5q14.3, 11q23.2, and 7p22.3 are the three genomic regions conferring highest pleiotropic effects for these psychiatric traits. The long non-coding gene LINC00461 showed the highest pleiotropic effects on five psychiatric traits. In silico and functional studies with mice support the vital role of LINC00461 in neurodevelopment. In sum, our study provides insights into the shared genetic liability among major psychiatric traits.
AB - Major psychiatric traits are genetically inter-correlated with one another, but it not well known which genes play pleiotropic effects across different traits. We curated and compared genes identified from large-scale genome-wide association studies for seven psychiatric traits, including depression, bipolar disorder, schizophrenia, autism spectrum disorder, attention-deficit/hyperactivity disorder, anxiety and neuroticism. We then explored biological functions of the top pleiotropic genes. A total of 243 cross-trait genes were identified for the seven traits. Except for autism spectrum disorder, there was significant enrichment of overlapped genes across these psychiatric traits. Chromosome 5q14.3, 11q23.2, and 7p22.3 are the three genomic regions conferring highest pleiotropic effects for these psychiatric traits. The long non-coding gene LINC00461 showed the highest pleiotropic effects on five psychiatric traits. In silico and functional studies with mice support the vital role of LINC00461 in neurodevelopment. In sum, our study provides insights into the shared genetic liability among major psychiatric traits.
UR - http://www.scopus.com/inward/record.url?scp=85076185646&partnerID=8YFLogxK
U2 - 10.1007/s00439-019-02096-4
DO - 10.1007/s00439-019-02096-4
M3 - Artículo
C2 - 31813014
AN - SCOPUS:85076185646
SN - 0340-6717
VL - 139
SP - 185
EP - 198
JO - Human Genetics
JF - Human Genetics
IS - 2
ER -