Camilo Thorne

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Camilo Thorne

PhD

 https://orcid.org/0000-0002-6960-772X

    • Ostendstr. 1

      60314 Frankfurt

      Germany

    • 98
      Citations
    20072024

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    • 2024

      Automated Synonym Discovery for Taxonomy Maintenance Using Semantic Search Techniques

      Moradi Fard, M., Thorne, C., Sorolla Bayod, P., Akhondi, S. & Vlietstra, W., 2024, Natural Language Processing and Information Systems - 29th International Conference on Applications of Natural Language to Information Systems, NLDB 2024, Proceedings. Rapp, A., Di Caro, L., Meziane, F. & Sugumaran, V. (eds.). Springer Science and Business Media Deutschland GmbH, p. 352-358 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14763 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Learning Section Weights for Multi-label Document Classification

      Moradi Fard, M., Sorolla Bayod, P., Motarjem, K., Alian Nejadi, M., Akhondi, S. & Thorne, C., 2024, Natural Language Processing and Information Systems - 29th International Conference on Applications of Natural Language to Information Systems, NLDB 2024, Proceedings. Rapp, A., Di Caro, L., Meziane, F. & Sugumaran, V. (eds.). Springer Science and Business Media Deutschland GmbH, p. 359-366 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14763 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • NLP for Chemistry - Introduction and Recent Advances

      Thorne, C. & Akhondi, S., 2024, 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, LREC-COLING 2024 - Tutorial Summaries. Klinger, R. & Okazaki, N. (eds.). European Language Resources Association (ELRA), p. 45-49 5 p. (2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation, LREC-COLING 2024 - Tutorial Summaries).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2022

      Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents

      Li, Y., Fang, B., He, J., Yoshikawa, H., Akhondi, S. A., Druckenbrodt, C., Thorne, C., Afzal, Z., Zhai, Z., Baldwin, T. & Verspoor, K., 2022, Experimental IR Meets Multilinguality, Multimodality, and Interaction - 13th International Conference of the CLEF Association, CLEF 2022, Proceedings. Barrón-Cedeño, A., Da San Martino, G., Faggioli, G., Ferro, N., Degli Esposti, M., Sebastiani, F., Macdonald, C., Pasi, G., Hanbury, A. & Potthast, M. (eds.). Springer Science and Business Media Deutschland GmbH, p. 521-540 20 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13390 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • The ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents

      Li, Y., Fang, B., He, J., Yoshikawa, H., Akhondi, S. A., Druckenbrodt, C., Thorne, C., Zhai, Z., Afzal, Z., Cohn, T., Baldwin, T. & Verspoor, K., 2022, Advances in Information Retrieval - 44th European Conference on IR Research, ECIR 2022, Proceedings. Hagen, M., Verberne, S., Macdonald, C., Seifert, C., Balog, K., Nørvåg, K. & Setty, V. (eds.). Springer Science and Business Media Deutschland GmbH, p. 400-407 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13186 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      3 Scopus citations
    • 2021

      ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents

      He, J., Fang, B., Yoshikawa, H., Li, Y., Akhondi, S. A., Druckenbrodt, C., Thorne, C., Afzal, Z., Zhai, Z., Cavedon, L., Cohn, T., Baldwin, T. & Verspoor, K., 2021, Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Proceedings. Hiemstra, D., Moens, M.-F., Mothe, J., Perego, R., Potthast, M. & Sebastiani, F. (eds.). Springer Science and Business Media Deutschland GmbH, p. 608-615 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12657 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      11 Scopus citations

    • Disease Normalization with Graph Embeddings

      Pujary, D., Thorne, C. & Aziz, W., 2021, Intelligent Systems and Applications - Proceedings of the 2020 Intelligent Systems Conference IntelliSys Volume 2. Arai, K., Kapoor, S. & Bhatia, R. (eds.). Springer, p. 209-217 9 p. (Advances in Intelligent Systems and Computing; vol. 1251 AISC).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Stress Test Evaluation of BiomedicalWord Embeddings

      Araujo, V., Carvallo, A., Aspillaga, C., Thorne, C. & Parra, D., 2021, BioNLP.

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Stress Test Evaluation of Biomedical Word Embeddings

      Araujo, V., Carvallo, A., Aspillaga, C., Thorne, C. & Parra, D., 2021, Proceedings of the 20th Workshop on Biomedical Language Processing, BioNLP 2021. Demner-Fushman, D., Cohen, K. B., Ananiadou, S. & Tsujii, J. (eds.). Association for Computational Linguistics (ACL), p. 119-125 7 p. (Proceedings of the 20th Workshop on Biomedical Language Processing, BioNLP 2021).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      2 Scopus citations
    • 2020

      An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents

      He, J., Nguyen, D. Q., Akhondi, S., Drukenbrodt, C., Thorne, C., Hoessel, R., Afzal, Z., Zhai, Z., Fang, B., Yoshikawa, H., Albahem, A., Wang, J., Cavedon, L., Cohn, T. & Verspoor, K., 2020, Proceedings of the CLEF 2020 conference..

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • ChEMU: Named entity recognition and event extraction of chemical reactions from patents

      Nguyen, D. Q., Zhai, Z., Yoshikawa, H., Fang, B., Druckenbrodt, C., Thorne, C., Hoessel, R., Akhondi, S. A., Cohn, T., Baldwin, T. & Verspoor, K., 2020, Advances in Information Retrieval - 42nd European Conference on IR Research, ECIR 2020, Proceedings. Jose, J. M., Yilmaz, E., Magalhães, J., Martins, F., Castells, P., Ferro, N. & Silva, M. J. (eds.). Springer, p. 572-579 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12036 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2019

      Improving chemical named entity recognition in patents with contextualized word embeddings

      Zhai, Z., Nguyen, D. Q., Akhondi, S. A., Thorne, C., Druckenbrodt, C., Cohn, T., Gregory, M. & Verspoor, K., 2019, BioNLP 2019 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 18th BioNLP Workshop and Shared Task. Association for Computational Linguistics (ACL), p. 328-338 11 p. (BioNLP 2019 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 18th BioNLP Workshop and Shared Task).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Improving Chemical Named Entity Recognition in Patents with Contextualized Word Embeddings

      Zhai, Z., Thorne, C., Akhondi, S., Verspoor, K., Nguyen, D. Q., Cohn, T. & Drukenbrodt, C., 2019, Improving Chemical Named Entity Recognition in Patents with Contextualized Word Embeddings.

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      Open Access
    • 2018

      On the semantic similarity of disease mentions in medline® and twitter

      Thorne, C. & Klinger, R., 2018, Natural Language Processing and Information Systems - 23rd International Conference on Applications of Natural Language to Information Systems, NLDB 2018, Proceedings. Meziane, F., Silberztein, M., Atigui, F., Kornyshova, E. & Metais, E. (eds.). Springer Verlag, p. 324-332 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10859 LNCS).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2017

      Exploring Unsupervised Features in Conditional Random Fields for Spanish Named Entity Recognition

      Copara, J., Ochoa, J., Thorne, C. & Glavas, G., Feb 1 2017, Proceedings - 2016 5th Brazilian Conference on Intelligent Systems, BRACIS 2016. Institute of Electrical and Electronics Engineers Inc., p. 283-288 6 p. 7839600. (Proceedings - 2016 5th Brazilian Conference on Intelligent Systems, BRACIS 2016).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      3 Scopus citations
    • 2016

      Conditional random fields for Spanish named entity recognition using unsupervised features

      Copara, J., Ochoa, J., Thorne, C. & Glavăs, G., 2016, Advances in Artificial Intelligence - IBERAMIA 2016 - 15th Ibero-American Conference on AI 2016, Proceedings. Escalante, H. J., Montes-y-Gomez, M., Segura, A. & de Dios Murillo, J. (eds.). Springer Verlag, p. 175-186 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10022 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Cross-evaluation of entity linking and disambiguation systems for clinical text annotation

      Thorne, C., Faralli, S. & Stuckenschmidt, H., Sep 12 2016, Proceedings of the 12th International Conference on Semantic Systems: The Linked Data Conference, SEMANTiCS 2016. Fensel, A., Pellegrini, T., Hellmann, S. & Zaveri, A. (eds.). Association for Computing Machinery, p. 169-172 4 p. 2993345. (ACM International Conference Proceeding Series; vol. 13-14-September-2016).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      Open Access

    • Spanish ner with word representations and conditional random fields

      Copara, J., Ochoa, J., Thorne, C. & Glavaš, G., 2016, Proceedings of NEWS 2016: 6th Named Entity Workshop at the 54th Annual Meeting of the Association for Computational Linguistics, ACL 2016. Duan, X., Banchs, R. E., Zhang, M., Li, H. & Kumara, A. (eds.). Association for Computational Linguistics (ACL), p. 34-40 7 p. (Proceedings of NEWS 2016: 6th Named Entity Workshop at the 54th Annual Meeting of the Association for Computational Linguistics, ACL 2016).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2015

      Semantic complexity of quantifiers and their distribution in corpora

      Thorne, C. & Szymanik, J., 2015, IWCS 2015 - Proceedings of the 11th International Conference on Computational Semantics. Association for Computational Linguistics (ACL), p. 64-69 6 p. (IWCS 2015 - Proceedings of the 11th International Conference on Computational Semantics).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Towards decision making via expressive probabilistic ontologies

      Acar, E., Thorne, C. & Stuckenschmidt, H., 2015, Algorithmic Decision Theory - 4th International Conference, ADT 2015, Proceedings. Walsh, T. (ed.). Springer Verlag, p. 52-68 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9346).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      3 Scopus citations
    • 2013

      Automated Activity Recognition in Clinical Documents

      Thorne, C., Montali, M., Calvanese, D., Cardillo, E. & Eccher, C., 2013, 6th International Joint Conference on Natural Language Processing, IJCNLP 2013 - Proceedings of the Main Conference. Mitkov, R. & Park, J. C. (eds.). Asian Federation of Natural Language Processing, p. 1129-1133 5 p. (6th International Joint Conference on Natural Language Processing, IJCNLP 2013 - Proceedings of the Main Conference).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • Process fragment recognition in clinical documents

      Thorne, C., Cardillo, E., Eccher, C., Montali, M. & Calvanese, D., 2013, AI*IA 2013: Advances in Artificial Intelligence - XIIIth International Conference of the Italian Association for Artificial Intelligence, Proceedings. p. 227-238 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8249 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2011

      Querying the fragments of english

      Thorne, C., 2011, Logic, Language, Information and Computation - 18th International Workshop, WoLLIC 2011, Proceedings. Springer Verlag, p. 257-271 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6642 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2010

      Controlled english ontology-based data access

      Thorne, C. & Calvanese, D., 2010, Controlled Natural Language - Workshop on Controlled Natural Language, CNL 2009, Revised Papers. p. 135-154 20 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5972 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      2 Scopus citations

    • The data complexity of the syllogistic fragments of english

      Thorne, C. & Calvanese, D., 2010, Logic, Language and Meaning - 17th Amsterdam Colloquium, Revised Selected Papers. p. 114-123 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6042 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      3 Scopus citations
    • 2009

      Controlled aggregate tree shaped questions over ontologies

      Thorne, C. & Calvanese, D., 2009, Flexible Query Answering Systems - 8th International Conference, FQAS 2009, Proceedings. p. 394-405 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5822 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    • 2008

      Aggregate queries over ontologies

      Calvanese, D., Kharlamov, E., Nutt, W. & Thorne, C., 2008, Proc. of the 2nd International Workshop on Ontologies and Information Systems for the Semantic Web, ONISW'08, Co-located with the 17th ACM Conference on Information and Knowledge Management, CIKM'08. p. 97-104 8 p. (International Conference on Information and Knowledge Management, Proceedings).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

      Open Access
    • 2007

      English querying over ontologies: E-QuOnto

      Bernardi, R., Bonin, F., Calvanese, D., Carbotta, D. & Thorne, C., 2007, AI IA 2007: Artificial Intelligence and Human-Oriented Computing - 10th Congress of the Italian Association for Artificial Intelligence, Proceedings. Springer Verlag, p. 170-181 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4733 LNAI).

      Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review